MMV-Region Segmentation
mmv-regionsegNapari plugin for the segmentation of regions by flood
First released:
21 March 2025Last updated:
21 March 2025Installs:
0Plugin type:
Widget
Workflow step:
Image segmentation
Plugins
Browse plugins: 490
nDev
napari-ndevnapari widgets to (batch) process images from start to finish.
First released:
31 January 2023Last updated:
20 March 2025Installs:
1.1KPlugin type:
Reader, Widget
T-MIDAS
napari-tmidasTissue Microscopy Image Data Analysis Suite
- Marco Meer
First released:
05 March 2025Last updated:
18 March 2025Installs:
49Plugin type:
Reader, Sample data, Widget, Writer
Workflow step:
Image segmentation
Image annotation
Napari Topological Skeleton Analysis
napari-toskaExtraacts and analyses topological skeletons as undirected graphs
- Allyson Quinn Ryan
- Johannes Soltwedel
First released:
08 July 2024Last updated:
17 March 2025Installs:
81Plugin type:
Widget
napari-locan
napari-locanUse locan methods in napari for single-molecule localization microscopy data.
- napari-locan Developers
First released:
29 October 2023Last updated:
17 March 2025Installs:
191Plugin type:
Sample data, Widget
Feature Forest
featureforestA napari plugin for segmentation using vision transformer features
First released:
10 October 2024Last updated:
17 March 2025Installs:
129Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
movement
movementAnalysis of body movement
First released:
02 April 2020Last updated:
14 March 2025Installs:
3.4KPlugin type:
Widget
nnInteractive
napari-nninteractivennInteractive plugin for Napari
First released:
11 March 2025Last updated:
14 March 2025Installs:
224Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
Vessel Quality Check
VessQCNapari plugin for checking and correcting the segmentation
First released:
18 February 2025Last updated:
13 March 2025Installs:
41Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
psf-analysis-CFIM
psf-analysis-CFIMA continuation of napari_psf_analysis, developed for CFIM - KU
- Markus L. Bille
First released:
11 February 2025Last updated:
13 March 2025Installs:
105Plugin type:
Reader, Widget
napari-omero
napari-omeronapari/OMERO interoperability
- Peter Sobolewski
First released:
24 June 2020Last updated:
12 March 2025Installs:
838Plugin type:
Reader, Widget
Hyperspectral Imaging Analysis Plugin
napari-hsi-analysisNapari plugin to perform analysis on Hyperspectral Imaging datasets.
- Alessia Di Benedetto
First released:
12 March 2025Last updated:
12 March 2025Installs:
36Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
PartSeg
PartSegPartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,
First released:
14 January 2019Last updated:
10 March 2025Installs:
8.1KPlugin type:
Reader, Widget, Writer
brainreg
brainregAutomated multi-atlas whole-brain microscopy registration
First released:
26 May 2020Last updated:
10 March 2025Installs:
12KPlugin type:
Sample data, Widget
BrainGlobe
brainglobe-utilsShared general purpose tools for the BrainGlobe project
First released:
23 June 2023Last updated:
10 March 2025Installs:
30KPlugin type:
Widget