Discover, install, and share napari plugins

  • Discover plugins that solve your image analysis challenges
  • Learn how to install into napari
  • Share your image analysis tools with napari’s growing community
  • Share your image analysis tools with napari’s growing community

Browse plugins: 141

iacs-ipac-reader

A reader plugin for read iacs/ipac images and export .rtdc files.

  • Chenqi Zhang
  • version
    0.0.6
  • release date
    21 January 2022
  • license
    BSD-3-Clause
  • Python version
    >=3.7
  • operating system
    All

    napari-clusters-plotter

    A plugin to use with napari for clustering objects according to their properties

    • Laura Zigutyte, Ryan Savill, Marcelo Zoccoler, Robert Haase
    • version
      0.2.2
    • release date
      20 January 2022
    • license
      BSD-3-Clause
    • Python version
      <3.10,>=3.7
    • operating system
      All

      napari-labelling-assistant

      A lightweight plugin for visualizing labelling statistics.

      • Pranjal Dhole
      • version
        0.0.4
      • release date
        20 January 2022
      • license
        MIT
      • Python version
        >=3.7
      • operating system
        All

        napari-segment-blobs-and-things-with-membranes

        A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes

        • Robert Haase
        • version
          0.2.14
        • release date
          20 January 2022
        • license
          BSD-3-Clause
        • Python version
          >=3.7
        • operating system
          All
          Image modalityFluorescence microscopy
          Workflow stepImage Segmentation
          Workflow stepImage enhancement
          Workflow stepImage reconstruction

        napari-imsmicrolink

        Plugin to perform IMS to microscopy registration using laser ablation marks.

        • Nathan Heath Patterson
        • Lukasz Migas
        • version
          0.1.5.1
        • release date
          19 January 2022
        • license
          MIT
        • Python version
          >=3.7
        • operating system
          All

          napari-nucleaizer

          Napari integration of the nucleaizer algorithm. (https://nucleaizer.org)

          • Ervin Tasnadi
          • version
            0.1.10
          • release date
            19 January 2022
          • license
            BSD-3-Clause
          • Python version
            >=3.6
          • operating system
            All

            napari-math

            Simple mathematical operations on image, point and surface layers.

            • Zach Marin, Talley Lambert
            • version
              0.0.1a0
            • release date
              18 January 2022
            • license
              MIT
            • Python version
              >=3.7
            • operating system
              All

              napari-pymeshlab

              Interfaces between napari and pymeshlab library to allow import, export and construction of surfaces.

              • Zach Marin
              • version
                0.0.4
              • release date
                18 January 2022
              • license
                MIT
              • Python version
                >=3.7
              • operating system
                All

                PartSeg

                PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,

                • Grzegorz Bokota
                • version
                  0.13.15
                • release date
                  18 January 2022
                • license
                  BSD-3-Clause
                • Python version
                  >=3.7
                • operating system
                  All
                  Workflow stepImage Segmentation
                  Workflow stepImage reconstruction
                  Workflow stepImage feature detection
                  Workflow stepObject feature extraction

                napari-image-stacker

                A plugin designed to convert multiple open layers into a stack or vice versa

                • Robin Koch, Marc Boucsein
                • version
                  0.1.8
                • release date
                  17 January 2022
                • license
                  BSD-3-Clause
                • Python version
                  >=3.7
                • operating system
                  All

                  vollseg-napari

                  Irregular cell shape segmentation using VollSeg

                  • Varun Kapoor
                  • version
                    1.0.5
                  • release date
                    16 January 2022
                  • license
                    BSD 3-Clause License
                  • Python version
                    >=3.7
                  • operating system
                    All

                    napari-layer-details-display

                    A display for layer information and properties

                    • Robert Haase
                    • version
                      0.1.2
                    • release date
                      15 January 2022
                    • license
                      BSD-3-Clause
                    • Python version
                      >=3.7
                    • operating system
                      All

                      Partial-Aligner

                      A napari plugin for manual registration of (a part of) an image

                      • Marc Boucsein, Robin Koch
                      • version
                        0.0.1
                      • release date
                        14 January 2022
                      • license
                        BSD-3-Clause
                      • Python version
                        >=3.9
                      • operating system
                        All

                        World2Data

                        A napari plugin in order to convert the world information to the data of a 2D/3D layer

                        • Marc Boucsein, Robin Koch
                        • version
                          0.0.3
                        • release date
                          14 January 2022
                        • license
                          BSD-3-Clause
                        • Python version
                          >=3.7
                        • operating system
                          All

                          Layer-Data-Replace

                          A napari plugin in order to replace parts of the data of a layer by another one

                          • Marc Boucsein, Robin Koch
                          • version
                            0.0.5
                          • release date
                            13 January 2022
                          • license
                            BSD-3-Clause
                          • Python version
                            >=3.7
                          • operating system
                            All

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