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Plugins

Browse plugins: 401

blik

blik

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

  • Lorenzo Gaifas
  • First released:

    15 June 2021
  • Last updated:

    23 February 2024
  • Installs:

    605
  • Plugin type:

    information not submitted

napatrackmater

napatrackmater

Import Trackmate XML files for Track Visualization and analysis in Napari.

  • Varun Kapoor
  • Mari Tolonen
  • Jakub Sedzinski
  • First released:

    16 January 2021
  • Last updated:

    23 February 2024
  • Installs:

    4.9K
  • Plugin type:

    information not submitted

napari NanoPyx

napari-nanopyx

napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging

  • Ricardo Henriques
  • Bruno Saraiva
  • Inês Cunha
  • António Brito
  • First released:

    10 May 2023
  • Last updated:

    20 February 2024
  • Installs:

    306
  • Plugin type:

    Widget

napari-chatgpt | Omega

napari-chatgpt

A napari plugin to process and analyse images with chatGPT.

  • Loic A. Royer
  • First released:

    03 May 2023
  • Last updated:

    20 February 2024
  • Installs:

    938
  • Plugin type:

    Widget

napari-h5

napari-h5

A hdf5 file reader plugin for napari

  • Luis Perdigao
  • First released:

    07 August 2023
  • Last updated:

    19 February 2024
  • Installs:

    264
  • Plugin type:

    Reader, Writer

Tomocube data viewer

napari-tomocube-data-viewer

"A plugin to visualize three-dimensional data from Tomocube's microscopy"

  • Dohyeon Lee
  • First released:

    06 March 2023
  • Last updated:

    19 February 2024
  • Installs:

    110
  • Plugin type:

    Reader

Brainways

napari-brainways

Brainways UI

  • Ben Kantor
  • First released:

    26 May 2023
  • Last updated:

    18 February 2024
  • Installs:

    1.1K
  • Plugin type:

    Reader, Sample data, Widget

Napari Select Foreground

napari-rembg

AI-based foreground extraction in scientific and natural images.

  • Mallory Wittwer
  • First released:

    28 September 2023
  • Last updated:

    17 February 2024
  • Installs:

    149
  • Plugin type:

    Sample data, Widget

3D Counter

napari-3d-counter

A simple plugin for counting objects in 3D images

  • Peter Newstein
  • First released:

    18 October 2023
  • Last updated:

    16 February 2024
  • Installs:

    187
  • Plugin type:

    Widget

napari ARCOS

arcos-gui

A napari plugin to detect and visualize collective signaling events

  • Benjamin Grädel
  • First released:

    24 February 2022
  • Last updated:

    15 February 2024
  • Installs:

    471
  • Plugin type:

    Sample data, Widget

napari-tiff

napari-tiff

official napari tiff reader and writer.

  • Genevieve Buckley
  • napari-tiff contributors
  • First released:

    14 February 2024
  • Last updated:

    14 February 2024
  • Installs:

    32
  • Plugin type:

    Reader

anchor-droplet-chip

anchor-droplet-chip

Segment organoids and measure intensities

  • Andrey Aristov
  • First released:

    13 March 2023
  • Last updated:

    14 February 2024
  • Installs:

    351
  • Plugin type:

    Reader, Sample data, Widget

Annotation Toolbox

napari-nD-annotator

A toolbox for annotating objects one by one in nD

  • David Bauer
  • Jozsef Molnar
  • Dominik Hirling
  • First released:

    01 June 2022
  • Last updated:

    14 February 2024
  • Installs:

    1K
  • Plugin type:

    Widget

domb-napari

domb-napari

napari plugin for analyzing fluorescence-labeled proteins redistribution

  • Borys Olifirov
  • First released:

    22 November 2023
  • Last updated:

    13 February 2024
  • Installs:

    131
  • Plugin type:

    Widget

Napari Tracer Plugin

napari-tracing

A plugin to trace the brightest path between two points in an image

  • Vasudha Jha
  • First released:

    23 April 2023
  • Last updated:

    13 February 2024
  • Installs:

    92
  • Plugin type:

    Widget

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