The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

Plugins

Browse plugins: 508

ROXAS AI

napari-roxas-ai

A plugin that integrates the ROXAS AI analysis methods for quantitative wood anatomy in the napari platform

  • Nicola Antonio Santacroce
  • Marc Katzenmaier
  • Triyan Bhardwaj
  • Georg von Arx
  • First released:

    17 May 2025
  • Last updated:

    19 June 2025
  • Installs:

    0
  • Plugin type:

    Reader, Sample data, Widget, Writer
Workflow step:
Image annotation
Image segmentation

napari clusters plotter

napari-clusters-plotter

A plugin to use with napari for clustering objects according to their properties

  • Laura Zigutyte
  • Ryan Savill
  • Marcelo Zoccoler
  • Thorsten Wagner
  • Robert Haase
  • First released:

    15 November 2021
  • Last updated:

    17 June 2025
  • Installs:

    8.6K
  • Plugin type:

    Sample data, Widget

PSF Generator

napari-psfgenerator

Plugin to compute the focal electric field

    • First released:

      05 February 2025
    • Last updated:

      17 June 2025
    • Installs:

      43
    • Plugin type:

      Reader, Sample data, Widget, Writer

    sc3D Viewer

    napari-sc3D-viewer

    A plugin to visualize 3D single cell omics

    • Leo Guignard
    • First released:

      21 June 2022
    • Last updated:

      17 June 2025
    • Installs:

      402
    • Plugin type:

      Widget

    Hyperspectral Imaging Analysis Plugin

    napari-hsi-analysis

    Napari plugin to perform analysis on Hyperspectral Imaging datasets.

    • Alessia Di Benedetto
    • First released:

      12 March 2025
    • Last updated:

      17 June 2025
    • Installs:

      82
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    Data Inspection

    napari-data-inspection

    Data Inspection Plugin, designed to streamline file navigation and enhance the efficiency of data inspection.

    • Lars Krämer
    • First released:

      16 June 2025
    • Last updated:

      16 June 2025
    • Installs:

      0
    • Plugin type:

      Widget

    Timelapse Processor

    napari-timelapse-processor

    meta plugin to ease processing timelapse image data

    • Johannes Soltwedel
    • First released:

      15 July 2024
    • Last updated:

      16 June 2025
    • Installs:

      1.5K
    • Plugin type:

      information not submitted
    Workflow step:
    Image annotation
    Image segmentation

    napari-spotiflow

    napari-spotiflow

    Napari plugin for Spotiflow

      • First released:

        02 February 2024
      • Last updated:

        16 June 2025
      • Installs:

        524
      • Plugin type:

        Reader, Sample data, Widget

      CCI Annotator

      napari-cci-annotator

      Plugin to simplify annotations of datasets

      • Anders Folkesson
      • First released:

        28 April 2025
      • Last updated:

        16 June 2025
      • Installs:

        75
      • Plugin type:

        Widget
      Workflow step:
      Image segmentation
      Image annotation

      arcosPx

      arcosPx-napari

      A plugin to track spatio-temporal correlations in images

      • Benjamin Grädel
      • First released:

        27 March 2025
      • Last updated:

        14 June 2025
      • Installs:

        34
      • Plugin type:

        Widget
      Workflow step:
      Image segmentation

      Tapenade Processing

      napari-tapenade-processing

      A visual pipeline to process images with Tapenade in Napari

      • Jules Vanaret
      • First released:

        13 August 2024
      • Last updated:

        13 June 2025
      • Installs:

        270
      • Plugin type:

        Widget
      Workflow step:
      Image segmentation
      Image annotation

      Vessel Quality Check

      VessQC

      Napari plugin for checking and correcting the segmentation

        • First released:

          18 February 2025
        • Last updated:

          13 June 2025
        • Installs:

          54
        • Plugin type:

          Widget
        Workflow step:
        Image annotation
        Image segmentation

        Brendan Beads

        brendan-beads

        Calculating and visualizing distances of beads to surface

        • Anders Folkesson
        • First released:

          20 May 2025
        • Last updated:

          13 June 2025
        • Installs:

          0
        • Plugin type:

          Widget
        Workflow step:
        Image segmentation
        Image annotation

        napari vedo bridge

        napari-vedo-bridge

        Transfer mesh data between napari and vedo for interactive processing

        • Johannes Soltwedel
        • Marco Musy
        • First released:

          03 July 2023
        • Last updated:

          13 June 2025
        • Installs:

          816
        • Plugin type:

          Reader, Sample data, Widget, Writer

        napari STRESS

        napari-stress

        Interactive surface analysis in napari for measuring mechanical stresses in biological tissues

        • Johannes Soltwedel
        • Ben J. Gross
        • Elijah Shelton
        • Carlos Gomez
        • Otger Campas
        • First released:

          02 June 2022
        • Last updated:

          13 June 2025
        • Installs:

          1.5K
        • Plugin type:

          Sample data, Widget