The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

Plugins

Browse plugins: 508

napari feature classifier

napari-feature-classifier

An interactive classifier plugin to use with label images and feature measurements

  • Joel Luethi
  • Max Hess
  • First released:

    12 February 2022
  • Last updated:

    27 June 2025
  • Installs:

    1.1K
  • Plugin type:

    Widget

Napari Feature Visualization

napari-feature-visualization

Visualizing feature measurements on label images in napari

  • Joel Luethi
  • Adrian Tschan
  • First released:

    25 July 2024
  • Last updated:

    27 June 2025
  • Installs:

    183
  • Plugin type:

    Sample data, Widget
Workflow step:
Image annotation

AxonDeepSeg

AxonDeepSeg

Axon/Myelin segmentation using AI

    • First released:

      09 December 2017
    • Last updated:

      27 June 2025
    • Installs:

      2.1K
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    ImageGrains

    napari-imagegrains

    An interactive napari plugin for the ImageGrains software.

      • First released:

        26 June 2025
      • Last updated:

        26 June 2025
      • Installs:

        0
      • Plugin type:

        Widget
      Workflow step:
      Image segmentation
      Image annotation

      seu-3d

      seu-3d

      3d spatial visualization napari plugin

        • First released:

          26 May 2025
        • Last updated:

          25 June 2025
        • Installs:

          0
        • Plugin type:

          Widget

        Hyperspectral Imaging Analysis Plugin

        napari-hsi-analysis

        Napari plugin to perform analysis on Hyperspectral Imaging datasets.

        • Alessia Di Benedetto
        • First released:

          12 March 2025
        • Last updated:

          23 June 2025
        • Installs:

          82
        • Plugin type:

          Widget
        Workflow step:
        Image segmentation
        Image annotation

        pyav video plugin

        napari-pyav

        Napari plugin for reading videos using PyAV

        • jlab.berlin
        • First released:

          05 October 2024
        • Last updated:

          23 June 2025
        • Installs:

          83
        • Plugin type:

          Reader
        Workflow step:
        Image segmentation
        Image annotation

        FLIM phasor plotter

        napari-flim-phasor-plotter

        A plugin that performs phasor plot from TCSPC FLIM data.

        • Marcelo L. Zoccoler
        • Cornelia Wetzker
        • First released:

          17 August 2023
        • Last updated:

          23 June 2025
        • Installs:

          532
        • Plugin type:

          Reader, Sample data, Widget
        Workflow step:
        Image annotation
        Image segmentation

        Proofread Brainbow

        napari-proofread-brainbow

        Proofreading Brainbow images with napari

        • Seongbin Lim
        • First released:

          30 August 2022
        • Last updated:

          23 June 2025
        • Installs:

          255
        • Plugin type:

          Widget
        Workflow step:
        Image annotation

        Feature Forest

        featureforest

        A napari plugin for segmentation using vision transformer features

          • First released:

            10 October 2024
          • Last updated:

            22 June 2025
          • Installs:

            177
          • Plugin type:

            Widget
          Workflow step:
          Image annotation
          Image segmentation

          napari NanoPyx

          napari-nanopyx

          napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging

          • Ricardo Henriques
          • Bruno Saraiva
          • Inês Cunha
          • António Brito
          • First released:

            10 May 2023
          • Last updated:

            21 June 2025
          • Installs:

            644
          • Plugin type:

            Widget

          TARDIS-em napari plugin

          napari-tardis-em

          Tomogram and micrograph segmentation with TARDIS-em

          • Robert Kiewisz
          • First released:

            22 July 2024
          • Last updated:

            20 June 2025
          • Installs:

            292
          • Plugin type:

            Reader, Widget

          Annotation Toolbox

          napari-nD-annotator

          A toolbox for annotating objects one by one in nD

          • David Bauer
          • Jozsef Molnar
          • Dominik Hirling
          • First released:

            01 June 2022
          • Last updated:

            20 June 2025
          • Installs:

            2.9K
          • Plugin type:

            Widget

          ROXAS AI

          napari-roxas-ai

          A plugin that integrates the ROXAS AI analysis methods for quantitative wood anatomy in the napari platform

          • Nicola Antonio Santacroce
          • Marc Katzenmaier
          • Triyan Bhardwaj
          • Georg von Arx
          • First released:

            17 May 2025
          • Last updated:

            19 June 2025
          • Installs:

            0
          • Plugin type:

            Reader, Sample data, Widget, Writer
          Workflow step:
          Image annotation
          Image segmentation

          napari clusters plotter

          napari-clusters-plotter

          A plugin to use with napari for clustering objects according to their properties

          • Laura Zigutyte
          • Ryan Savill
          • Marcelo Zoccoler
          • Thorsten Wagner
          • Robert Haase
          • First released:

            15 November 2021
          • Last updated:

            17 June 2025
          • Installs:

            8.6K
          • Plugin type:

            Sample data, Widget