Plugins

Browse plugins: 379

Brainways

napari-brainways

Brainways UI

  • Ben Kantor
  • First released:

    26 May 2023
  • Last updated:

    03 December 2023
  • Installs:

    592
  • Plugin type:

    Reader, Sample data, Widget

iterseg

iterseg

napari plugin for iteratively improving unet-watershed segmentation

  • Abigail S McGovern
  • Juan Nunez-Iglesias
  • First released:

    01 December 2023
  • Last updated:

    03 December 2023
  • Installs:

    16
  • Plugin type:

    Widget

annotrack

annotrack

napari plugin for annotating tracks to estimate error rates

  • Abigail S McGovern
  • First released:

    01 December 2023
  • Last updated:

    03 December 2023
  • Installs:

    18
  • Plugin type:

    Widget

platetrack

platetrack

napari plugin for tracking platelets with trackpy

  • Abigail S McGovern
  • First released:

    03 December 2023
  • Last updated:

    03 December 2023
  • Installs:

    0
  • Plugin type:

    information not submitted

CryoET Data Portal

napari-cryoet-data-portal

List, preview, and open data from the CZII CryoET Data Portal

  • Andy Sweet
  • First released:

    14 August 2023
  • Last updated:

    01 December 2023
  • Installs:

    75
  • Plugin type:

    Reader, Sample data, Widget

blik

blik

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

  • Lorenzo Gaifas
  • First released:

    15 June 2021
  • Last updated:

    01 December 2023
  • Installs:

    415
  • Plugin type:

    information not submitted

Cut Detector

cut-detector

Automatic Cut Detector

  • Thomas Bonte
  • First released:

    17 October 2023
  • Last updated:

    01 December 2023
  • Installs:

    95
  • Plugin type:

    Widget

yt-napari

yt-napari

A napari plugin for loading data from yt

  • Chris Havlin
  • First released:

    02 May 2022
  • Last updated:

    30 November 2023
  • Installs:

    107
  • Plugin type:

    Reader, Widget

TomoTwin

napari-tomotwin

Several tools for the work with TomoTwin

  • Thorsten Wagner
  • First released:

    24 March 2023
  • Last updated:

    30 November 2023
  • Installs:

    493
  • Plugin type:

    Widget

Box Manager

napari-boxmanager

Particle selection tool for cryo-em

  • Markus Stabrin
  • First released:

    26 September 2022
  • Last updated:

    30 November 2023
  • Installs:

    2K
  • Plugin type:

    Reader, Widget, Writer

MouseCHD

mousechd-napari

A tool for heart segmentation and congenital heart defect detection in mice.

  • Hoa Nguyen
  • First released:

    18 November 2023
  • Last updated:

    30 November 2023
  • Installs:

    102
  • Plugin type:

    Reader, Sample data, Widget

napatrackmater

napatrackmater

Import Trackmate XML files for Track Visualization and analysis in Napari.

  • Varun Kapoor
  • Mari Tolonen
  • Jakub Sedzinski
  • First released:

    16 January 2021
  • Last updated:

    27 November 2023
  • Installs:

    3.5K
  • Plugin type:

    information not submitted

Sketchpose

napari-sketchpose

A segmentation plugin to adapt Omnipose implementation to partial labelling.

  • Clément Cazorla
  • First released:

    07 November 2023
  • Last updated:

    27 November 2023
  • Installs:

    260
  • Plugin type:

    Reader, Sample data, Widget, Writer

domb-napari

domb-napari

Napari plugin implementing DoMB Tools for analyzing fluorescence-labeled proteins redistribution

  • Borys Olifirov
  • First released:

    22 November 2023
  • Last updated:

    23 November 2023
  • Installs:

    75
  • Plugin type:

    Widget

napari OrganoidCounter

napari-organoid-counter

A plugin to automatically count lung organoids

  • christinab12
  • First released:

    13 April 2022
  • Last updated:

    22 November 2023
  • Installs:

    150
  • Plugin type:

    Reader, Widget

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