napari Plugins

Plugins

Browse plugins: 379

Brainways

napari-brainways

Brainways UI

Ben Kantor

First released:
26 May 2023
Last updated:
03 December 2023
Installs:
592
Plugin type:
Reader, Sample data, Widget

iterseg

napari plugin for iteratively improving unet-watershed segmentation

Abigail S McGovern
Juan Nunez-Iglesias

First released:
01 December 2023
Last updated:
03 December 2023
Installs:
16
Plugin type:
Widget

annotrack

napari plugin for annotating tracks to estimate error rates

Abigail S McGovern

First released:
01 December 2023
Last updated:
03 December 2023
Installs:
18
Plugin type:
Widget

platetrack

napari plugin for tracking platelets with trackpy

Abigail S McGovern

First released:
03 December 2023
Last updated:
03 December 2023
Installs:
0
Plugin type:
information not submitted

CryoET Data Portal

napari-cryoet-data-portal

List, preview, and open data from the CZII CryoET Data Portal

Andy Sweet

First released:
14 August 2023
Last updated:
01 December 2023
Installs:
75
Plugin type:
Reader, Sample data, Widget

blik

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

Lorenzo Gaifas

First released:
15 June 2021
Last updated:
01 December 2023
Installs:
415
Plugin type:
information not submitted

Cut Detector

cut-detector

Automatic Cut Detector

Thomas Bonte

First released:
17 October 2023
Last updated:
01 December 2023
Installs:
95
Plugin type:
Widget

yt-napari

A napari plugin for loading data from yt

Chris Havlin

First released:
02 May 2022
Last updated:
30 November 2023
Installs:
107
Plugin type:
Reader, Widget

TomoTwin

napari-tomotwin

Several tools for the work with TomoTwin

Thorsten Wagner

First released:
24 March 2023
Last updated:
30 November 2023
Installs:
493
Plugin type:
Widget

Box Manager

napari-boxmanager

Particle selection tool for cryo-em

Markus Stabrin

First released:
26 September 2022
Last updated:
30 November 2023
Installs:
2K
Plugin type:
Reader, Widget, Writer

MouseCHD

mousechd-napari

A tool for heart segmentation and congenital heart defect detection in mice.

Hoa Nguyen

First released:
18 November 2023
Last updated:
30 November 2023
Installs:
102
Plugin type:
Reader, Sample data, Widget

napatrackmater

Import Trackmate XML files for Track Visualization and analysis in Napari.

Varun Kapoor
Mari Tolonen
Jakub Sedzinski

First released:
16 January 2021
Last updated:
27 November 2023
Installs:
3.5K
Plugin type:
information not submitted

Sketchpose

napari-sketchpose

A segmentation plugin to adapt Omnipose implementation to partial labelling.

Clément Cazorla

First released:
07 November 2023
Last updated:
27 November 2023
Installs:
260
Plugin type:
Reader, Sample data, Widget, Writer

domb-napari

Napari plugin implementing DoMB Tools for analyzing fluorescence-labeled proteins redistribution

Borys Olifirov

First released:
22 November 2023
Last updated:
23 November 2023
Installs:
75
Plugin type:
Widget

napari OrganoidCounter

napari-organoid-counter

A plugin to automatically count lung organoids

christinab12

First released:
13 April 2022
Last updated:
22 November 2023
Installs:
150
Plugin type:
Reader, Widget

Plugins

Browse plugins: 379

Brainways

First released:

Last updated:

Installs:

Plugin type:

iterseg

First released:

Last updated:

Installs:

Plugin type:

annotrack

First released:

Last updated:

Installs:

Plugin type:

platetrack

First released:

Last updated:

Installs:

Plugin type:

CryoET Data Portal

First released:

Last updated:

Installs:

Plugin type:

blik

First released:

Last updated:

Installs:

Plugin type:

Cut Detector

First released:

Last updated:

Installs:

Plugin type:

yt-napari

First released:

Last updated:

Installs:

Plugin type:

TomoTwin

First released:

Last updated:

Installs:

Plugin type:

Box Manager

First released:

Last updated:

Installs:

Plugin type:

MouseCHD

First released:

Last updated:

Installs:

Plugin type:

napatrackmater

First released:

Last updated:

Installs:

Plugin type:

Sketchpose

First released:

Last updated:

Installs:

Plugin type:

domb-napari

First released:

Last updated:

Installs:

Plugin type:

napari OrganoidCounter

First released:

Last updated:

Installs:

Plugin type:

Sign up to receive updates