napari Quoll

Resolution estimation for electron tomography

  • Elaine Ho

License PyPI Python Version tests codecov napari hub

Resolution estimation for electron tomography

The Python package which does the resolution estimation is Quoll. This repository, napari-quoll is just the Napari plugin.


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install napari-quoll via pip into a Python 3.7 environment, replacing <env_name> with an environment name of your choice:

conda -n create &lt;env_name&gt; python=3.7
conda activate &lt;env_name&gt;
pip install napari-quoll

To install latest development version :

pip install git+https://github.com/rosalindfranklininstitute/napari-quoll.git

Note: Due to miplib dependencies, this plugin only works on Python 3.7 environments.

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the Apache Software License 2.0 license, "napari-quoll" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Version:

  • 0.0.1

Last updated:

  • 2022-08-26

First released:

  • 2022-08-26

License:

  • Apache

Supported data:

  • Information not submitted

Plugin type:

Open extension:

Save extension:

Python versions supported:

Operating system:

  • Information not submitted

Requirements:

  • numpy
  • magicgui
  • qtpy
  • quoll
  • tox ; extra == 'testing'
  • pytest ; extra == 'testing'
  • pytest-cov ; extra == 'testing'
  • pytest-qt ; extra == 'testing'
  • napari ; extra == 'testing'
  • pyqt5 ; extra == 'testing'
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