napari molecule reader
A napari plugin that read molecular structure files.
A napari plugin that read molecular structure files. It reads PDB and MMCIF files using
atomium, expanding molecular assemblies to a full visualization. Data is loaded into napari as
Points for ball representation and
Vectors for stick representation. If multiple models or assemblies are detected, they will be loaded as separate objects.
-  handle alternate locations (i.e: different conformations in the same pdb model)
You can install
napari-molecule-reader via pip:
pip install napari-molecule-reader
To install latest development version :
pip install git+https://github.com/brisvag/napari-molecule-reader.git
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
Distributed under the terms of the BSD-3 license, "napari-molecule-reader" is free and open source software
If you encounter any problems, please file an issue along with a detailed description.
- 31 January 2022
- 21 December 2021
- Stars: 4
- Forks: 2
- Issues + PRs: 1