Version:

  • 0.1.9

Release date:

  • 01 January 2022

First released:

  • 22 October 2021

License:

  • MIT

Supported data:

  • Information not submitted

GitHub activity:

  • Stars: 8
  • Forks: 0
  • Issues + PRs: 0

Python versions supported:

  • >=3.7

Operating system:

  • OS Independent

Requirements:

  • napari-plugin-engine (>=0.1.4)
  • numpy
  • toolz
  • cupy
  • napari-tools-menu
  • scikit-image
  • napari-time-slicer
  • napari-skimage-regionprops

napari-cupy-image-processing

GPU-accelerated image processing using CUDA


    License PyPI Python Version tests codecov Development Status napari hub

    GPU-accelerated image processing using cupy and CUDA

    img.png


    This napari plugin was generated with Cookiecutter using with @napari's cookiecutter-napari-plugin template.

    Installation

    Follow the instructions for installing cupy on your computer first. Afterwards, you can install napari-cupy-image-processing via pip:

    pip install napari-cupy-image-processing

    A more detailed example for installation (change 10.2 to your CUDA version):

    conda create --name cupy_p38 python=3.8
    conda activate cupy_p38
    conda install -c conda-forge cupy cudatoolkit=10.2
    conda install napari
    pip install napari-cupy-image-processing

    Known issues

    When executing the first operation right after CUDA installation, napari may freeze and crash. Wait a minute and try again.

    Contributing

    Contributions are very welcome. Adding cupy ndimage functions is quite easy as you can see in the implementation of the current operations. If you need another function in napari, just send a PR. Please make sure the tests pass locally before submitting a PR.

    pip install pytest-cov pytest-qt
    pytest --cov=napari_cupy_image_processing

    License

    Distributed under the terms of the MIT license, "napari-cupy-image-processing" is free and open source software

    Issues

    If you encounter any problems, please file an issue along with a detailed description.

    Version:

    • 0.1.9

    Release date:

    • 01 January 2022

    First released:

    • 22 October 2021

    License:

    • MIT

    Supported data:

    • Information not submitted

    GitHub activity:

    • Stars: 8
    • Forks: 0
    • Issues + PRs: 0

    Python versions supported:

    • >=3.7

    Operating system:

    • OS Independent

    Requirements:

    • napari-plugin-engine (>=0.1.4)
    • numpy
    • toolz
    • cupy
    • napari-tools-menu
    • scikit-image
    • napari-time-slicer
    • napari-skimage-regionprops

    Version:

    • 0.1.9

    Release date:

    • 01 January 2022

    First released:

    • 22 October 2021

    License:

    • MIT

    Supported data:

    • Information not submitted

    GitHub activity:

    • Stars: 8
    • Forks: 0
    • Issues + PRs: 0

    Python versions supported:

    • >=3.7

    Operating system:

    • OS Independent

    Requirements:

    • napari-plugin-engine (>=0.1.4)
    • numpy
    • toolz
    • cupy
    • napari-tools-menu
    • scikit-image
    • napari-time-slicer
    • napari-skimage-regionprops

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