The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

BP04 Practical

napari-SMLMLAB

Napari widget for BP04 Practical.

Workflow step:
Image annotation
Image segmentation

License BSD-3 PyPI Python Version napari hub

Napari widget for BP04 Practical


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install napari-SMLMLAB via pip:

pip install napari-SMLMLAB

To upgrade to the latest version of napari-SMLMLAB from pip:

pip install napari-SMLMLAB --upgrade

To install latest development version :

conda create –-name napari-SMLMLAB python==3.9
conda activate napari-SMLMLAB
conda install -c anaconda git
conda update --all

pip install napari[all]

pip install git+https://github.com/piedrro/napari-SMLMLAB.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "napari-SMLMLAB" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Version:

  • 0.1.4

Last updated:

  • 13 November 2024

First released:

  • 25 April 2024

License:

Supported data:

  • Information not submitted

Plugin type:

GitHub activity:

  • Stars: 4
  • Forks: 3
  • Issues + PRs: 0

Python versions supported:

Operating system:

Requirements:

  • napari[all]==0.5.0
  • numpy
  • magicgui
  • qtpy
  • scipy
  • pyqtgraph
  • picassosr==0.7.3
  • matplotlib
  • tqdm
  • pyqt5-tools
  • trackpy