guanine-crystal-analysis

A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye


    License BSD-3 PyPI Python Version tests codecov napari hub

    A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye


    This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

    Installation

    You can install guanine-crystal-analysis via pip:

    pip install guanine-crystal-analysis

    To install latest development version :

    pip install git+https://github.com/biopo/guanine-crystal-analysis.git

    Contributing

    Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

    License

    Distributed under the terms of the BSD-3 license, "guanine-crystal-analysis" is free and open source software

    Issues

    If you encounter any problems, please file an issue along with a detailed description.

    Version:

    • 0.0.1

    Release date:

    • 26 July 2022

    First released:

    • 26 July 2022

    License:

    • BSD-3-Clause

    Supported data:

    • Information not submitted

    GitHub activity:

    • Stars: 1
    • Forks: 0
    • Issues + PRs: 0

    Python versions supported:

    Operating system:

    Requirements:

    • numpy
    • magicgui
    • qtpy
    • apoc
    • scikit-image
    • pandas
    • napari-simpleitk-image-processing
    • napari-skimage-regionprops
    • pyclesperanto-prototype
    • scikit-learn
    • napari-workflows

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