Discover, install, and share napari plugins

  • Discover plugins that solve your image analysis challenges
  • Learn how to install into napari
  • Share your image analysis tools with napari’s growing community
  • Share your image analysis tools with napari’s growing community

Browse plugins: 166

vessel-express-napari

A simple plugin for 3D vessel segmentation

  • Lennart Kowitz
  • version
    0.0.8
  • release date
    17 May 2022
  • license
    BSD-3-Clause
  • Python version
    >=3.7
  • operating system
    All

    napari-sim-processor

    A napari widget to process Structured Illumination Microscopy data with gpu acceleration

    • Andrea Bassi and Mark Neil
    • version
      0.0.6
    • release date
      16 May 2022
    • license
      BSD-3-Clause
    • Python version
      >=3.8
    • operating system
      All
      Image modality:
      Fluorescence microscopy
      Workflow step:
      Image reconstruction

    napari-assistant

    A pocket calculator like interface to image processing in napari

    • Robert Haase, Ryan Savill
    • version
      0.3.4
    • release date
      15 May 2022
    • license
      BSD-3-Clause
    • Python version
      >=3.7
    • operating system
      information not submitted

      napari-time-slicer

      A meta plugin for processing timelapse data in napari timepoint by timepoint

      • Robert Haase
      • version
        0.4.4
      • release date
        15 May 2022
      • license
        BSD-3-Clause
      • Python version
        >=3.7
      • operating system
        All

        napari-pyclesperanto-assistant

        GPU-accelerated image processing in napari using OpenCL

        • Robert Haase, Talley Lambert
        • version
          0.18.1
        • release date
          15 May 2022
        • license
          BSD-3-Clause
        • Python version
          >=3.6
        • operating system
          All
          Workflow step:
          Image Segmentation
          Image correction
          Image reconstruction
          Image enhancement
          Object feature extraction
          Morphological operations
          Image feature detection
          Visualization

        napari-workflow-inspector

        Inspect relationships between image processing operations in active workflows in napari

        • Robert Haase
        • version
          0.2.2
        • release date
          15 May 2022
        • license
          BSD-3-Clause
        • Python version
          >=3.7
        • operating system
          All

          devbio-napari

          A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.

          • Robert Haase
          • version
            0.5.4
          • release date
            13 May 2022
          • license
            BSD-3-Clause
          • Python version
            >=3.7
          • operating system
            All

            napari-roi-registration

            A plugin to perform roi registration.

            • Andrea Bassi and Giorgia Tortora
            • version
              0.0.9
            • release date
              13 May 2022
            • license
              BSD-3-Clause
            • Python version
              >=3.8
            • operating system
              All
              Workflow step:
              Image registration

            napari-psf-simulator

            A plugin for simulations of the Point Spread Function, with aberrations

            • Andrea Bassi
            • version
              0.1.4
            • release date
              12 May 2022
            • license
              BSD-3-Clause
            • Python version
              >=3.8
            • operating system
              All
              Image modality:
              Fluorescence microscopy

            napari-imsmicrolink

            Plugin to perform IMS to microscopy registration using laser ablation marks.

            • Nathan Heath Patterson
            • Lukasz Migas
            • version
              0.1.7
            • release date
              11 May 2022
            • license
              MIT
            • Python version
              >=3.7
            • operating system
              All

              palmari

              A pipeline for PALM movies analysis (pre-processing, localization, drifft correction, tracking)

              • Hippolyte Verdier
              • version
                0.1.2
              • release date
                10 May 2022
              • license
                "CeCILL"
              • Python version
                >=3.8
              • operating system
                All

                napari-labeling

                A napari plugin for handling overlapping labeling data

                • Tom Burke
                • version
                  0.1.2
                • release date
                  10 May 2022
                • license
                  BSD-3-Clause
                • Python version
                  >=3.7
                • operating system
                  All

                  napari-cupy-image-processing

                  GPU-accelerated image processing using CUDA

                  • Robert Haase
                  • version
                    0.2.3
                  • release date
                    08 May 2022
                  • license
                    MIT
                  • Python version
                    >=3.7
                  • operating system
                    All
                    Workflow step:
                    Image Segmentation
                    Image correction
                    Image reconstruction
                    Image enhancement
                    Morphological operations
                    Image feature detection

                  napari-segment-blobs-and-things-with-membranes

                  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes

                  • Robert Haase
                  • version
                    0.2.22
                  • release date
                    08 May 2022
                  • license
                    BSD-3-Clause
                  • Python version
                    >=3.7
                  • operating system
                    All
                    Image modality:
                    Fluorescence microscopy
                    Workflow step:
                    Image Segmentation
                    Image enhancement
                    Image reconstruction

                  napari-simpleitk-image-processing

                  Process and analyze images using SimpleITK in napari

                  • Robert Haase
                  • version
                    0.3.0
                  • release date
                    08 May 2022
                  • license
                    BSD-3-Clause
                  • Python version
                    >=3.7
                  • operating system
                    All
                    Workflow step:
                    Image Segmentation
                    Image correction
                    Image reconstruction
                    Image enhancement
                    Object feature extraction
                    Morphological operations
                    Image feature detection

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