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Browse plugins: 188

devbio-napari

devbio-napari

A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.

  • Robert Haase
  • version
    0.5.8
  • release date
    26 June 2022
  • Plugin type
    information not submitted

    vollseg-napari

    vollseg-napari

    Irregular cell shape segmentation using VollSeg

    • Varun Kapoor
    • version
      2.3.3
    • release date
      24 June 2022
    • Plugin type
      information not submitted
      Image modality:
      Medical imaging
      Workflow step:
      Image Segmentation

    arcos-gui

    arcos-gui

    A napari plugin to detect and visualize collective signaling events

    • Benjamin Grädel
    • version
      0.0.5
    • release date
      24 June 2022
    • Plugin type
      information not submitted

      Apple

      napari-apple

      Detection of apple based on YOLOv4 model

      • Herearii Metuarea
      • version
        0.0.1
      • release date
        23 June 2022
      • Plugin type
        Reader, Writer, Widget

        DEXP

        napari-dexp

        A simple plugin to use with napari

        • Jordao Bragantini
        • version
          0.0.7
        • release date
          23 June 2022
        • Plugin type
          Reader, Writer
          Image modality:
          Fluorescence microscopy
          Workflow step:
          Image reconstruction
          Image enhancement
          Image registration
          Image fusion
          Image correction
          Visualization

        btrack

        btrack

        A framework for Bayesian multi-object tracking

        • Alan R. Lowe
        • version
          0.4.5
        • release date
          23 June 2022
        • Plugin type
          Reader
          Workflow step:
          Object tracking

        napari labels overlap

        napari-labels-overlap

        create an overlap labels layer from two labels layers

        • Chi-Li Chiu
        • version
          0.0.3
        • release date
          22 June 2022
        • Plugin type
          Widget

          Napari Error Reporter

          napari-error-reporter

          Opt-in automated bug/error reporting for napari

          • Talley Lambert
          • version
            0.3.1
          • release date
            21 June 2022
          • Plugin type
            information not submitted

            napari-sc3D-viewer

            napari-sc3D-viewer

            A plugin to visualize 3D single cell omics

            • Leo Guignard
            • version
              0.1.0
            • release date
              21 June 2022
            • Plugin type
              information not submitted

              beetlesafari

              beetlesafari

              A napari plugin for loading and working with light sheet imaging data of developing embryos acquired using ClearControl, e.g. _Tribolium castaneum_.

              • Robert Haase
              • version
                0.4.0
              • release date
                21 June 2022
              • Plugin type
                information not submitted

                napari-time-slicer

                napari-time-slicer

                A meta plugin for processing timelapse data in napari timepoint by timepoint

                • Robert Haase
                • version
                  0.4.7
                • release date
                  21 June 2022
                • Plugin type
                  Widget

                  Blossom

                  napari-blossom

                  Segmentation of blossom apple tree images

                  • Herearii Metuarea
                  • version
                    0.0.1
                  • release date
                    20 June 2022
                  • Plugin type
                    Reader, Writer, Widget

                    Hesperos application

                    hesperos

                    A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.

                    • Charlotte Godard
                    • version
                      0.1.24
                    • release date
                      20 June 2022
                    • Plugin type
                      Widget

                      napari-flowering-apple-tree-pixel-classification

                      napari-flowering-apple-tree-pixel-classification

                      Get flowering apple tree based on UNET algorithm

                      • Herearii Metuarea
                      • version
                        0.1.0
                      • release date
                        19 June 2022
                      • Plugin type
                        information not submitted

                        napari-process-points-and-surfaces

                        napari-process-points-and-surfaces

                        Process and analyze surfaces using open3d and vedo in napari

                        • Robert Haase, Johannes Müller
                        • version
                          0.3.1
                        • release date
                          17 June 2022
                        • Plugin type
                          Widget
                          Workflow step:
                          Clustering
                          Visualization
                          Image annotation
                          Image Segmentation

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