The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

Plugins

Browse plugins: 514

napari-SAMV2

napari-SAMV2

Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data.

  • Krishnan Venkataraman
  • First released:

    08 October 2024
  • Last updated:

    16 July 2025
  • Installs:

    757
  • Plugin type:

    Widget
Workflow step:
Image segmentation
Image annotation

napari clusters plotter

napari-clusters-plotter

A plugin to use with napari for clustering objects according to their properties

  • Laura Zigutyte
  • Ryan Savill
  • Marcelo Zoccoler
  • Thorsten Wagner
  • Robert Haase
  • First released:

    15 November 2021
  • Last updated:

    16 July 2025
  • Installs:

    9.4K
  • Plugin type:

    Sample data, Widget

vollseg-napari

vollseg-napari

Irregular cell shape segmentation using VollSeg

  • Varun Kapoor
  • First released:

    10 December 2021
  • Last updated:

    16 July 2025
  • Installs:

    5.7K
  • Plugin type:

    Sample data, Widget

Data Inspection

napari-data-inspection

Data Inspection Plugin, designed to streamline file navigation and enhance the efficiency of data inspection.

  • Lars Krämer
  • First released:

    16 June 2025
  • Last updated:

    16 July 2025
  • Installs:

    24
  • Plugin type:

    Widget

SimpleAnnotate

napari-simpleannotate

A napari plugin for simple image and video annotation

    • First released:

      29 October 2023
    • Last updated:

      16 July 2025
    • Installs:

      203
    • Plugin type:

      Widget

    Napari Event Monitor

    napari-event-monitor

    Dynamic event monitoring and diagnostics in napari

      • First released:

        16 July 2025
      • Last updated:

        16 July 2025
      • Installs:

        0
      • Plugin type:

        Widget

      MolTrack

      napari-moltrack

      A user-friendly SMLM analysis platfrom for napari, which includes single molecule localisation, tracking, and analysis features.

      • Piers Turner
      • First released:

        30 May 2024
      • Last updated:

        15 July 2025
      • Installs:

        1.4K
      • Plugin type:

        Widget
      Workflow step:
      Image annotation
      Image segmentation

      Feature Forest

      featureforest

      A napari plugin for segmentation using vision transformer features

        • First released:

          10 October 2024
        • Last updated:

          15 July 2025
        • Installs:

          212
        • Plugin type:

          Widget
        Workflow step:
        Image annotation
        Image segmentation

        DINOSim Segmentation

        napari-dinosim

        A simple plugin to use DINOSim in napari

        • Aitor Gonzalez-Marfil
        • First released:

          05 March 2025
        • Last updated:

          15 July 2025
        • Installs:

          179
        • Plugin type:

          Widget
        Workflow step:
        Image segmentation
        Image annotation

        seu-3d

        seu-3d

        3d spatial visualization napari plugin

          • First released:

            26 May 2025
          • Last updated:

            14 July 2025
          • Installs:

            228
          • Plugin type:

            Widget

          napari-UniSPAC

          napari-UniSPAC

          A Unified Segmentation framework for Proofreading and Annotation in Connectomics (UniSPAC)!

            • First released:

              07 February 2025
            • Last updated:

              11 July 2025
            • Installs:

              94
            • Plugin type:

              Widget

            PartSeg

            PartSeg

            PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,

              • First released:

                14 January 2019
              • Last updated:

                10 July 2025
              • Installs:

                8.4K
              • Plugin type:

                Reader, Widget, Writer

              Label Manager

              napari-label-manager

              A plugin for management of label colormap generation and opacity control

              • JH Wang
              • First released:

                10 July 2025
              • Last updated:

                10 July 2025
              • Installs:

                17
              • Plugin type:

                Widget

              napari NanoPyx

              napari-nanopyx

              napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging

              • Ricardo Henriques
              • Bruno Saraiva
              • Inês Cunha
              • António Brito
              • First released:

                10 May 2023
              • Last updated:

                09 July 2025
              • Installs:

                735
              • Plugin type:

                Widget

              Napari Phasors

              napari-phasors

              A simple plugin to use phasor analysis

              • Bruno Pannunzio
              • Marcelo L. Zoccoler
              • Bruno Schuty
              • Leonel Malacrida
              • First released:

                22 November 2024
              • Last updated:

                08 July 2025
              • Installs:

                154
              • Plugin type:

                Reader, Sample data, Widget, Writer
              Workflow step:
              Image annotation
              Image segmentation