AFMReader
napari-afmreaderNapari plugin using AFMReader to load various Atomic Force Microscopy Images.
First released:
07 June 2025Last updated:
07 June 2025Installs:
0Plugin type:
Reader
Plugins
Browse plugins: 508
NuclePhaser
napari-nuclephaserA Napari plugin to detect and count nuclei on phase contrast images
- Nikita Voloshin
First released:
02 April 2025Last updated:
07 June 2025Installs:
62Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
movement
movementAnalysis of body movement
First released:
02 April 2020Last updated:
06 June 2025Installs:
4.9KPlugin type:
Widget
napari-pitcount-cfim
napari-pitcount-cfimA pipeline for stuff #TODO: Get knowledge to write a proper description Pitcount
- Markus L. Bille
First released:
24 April 2025Last updated:
04 June 2025Installs:
0Plugin type:
Widget
Frontveg
frontvegSegmentation of vegetation located to close to camera
- Herearii Metuarea
First released:
20 April 2025Last updated:
04 June 2025Installs:
10Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
domb-napari
domb-naparinapari plugin for analyzing the redistribution of fluorescence-labeled proteins
- Borys Olifirov
First released:
22 November 2023Last updated:
03 June 2025Installs:
416Plugin type:
Widget
PSF Generator
napari-psfgeneratorPlugin to compute the focal electric field
First released:
05 February 2025Last updated:
03 June 2025Installs:
43Plugin type:
Reader, Sample data, Widget, Writer
T-MIDAS
napari-tmidasA plugin for batch processing of confocal and whole-slide microscopy images of biological tissues
- Marco Meer
First released:
05 March 2025Last updated:
03 June 2025Installs:
132Plugin type:
Reader, Sample data, Widget, Writer
Workflow step:
Image segmentation
Image annotation
Bootstrapper
napari-bootstrapperA plugin to quickly generate dense ground truth with sparse labels
- Vijay Venu Thiyagarajan
First released:
23 May 2025Last updated:
02 June 2025Installs:
0Plugin type:
Sample data, Widget
Workflow step:
Image segmentation
Image annotation
ROXAS AI
napari-roxas-aiA plugin that integrates the ROXAS AI analysis methods for quantitative wood anatomy in the napari platform
- Nicola Antonio Santacroce
- Marc Katzenmaier
- Triyan Bhardwaj
- Georg von Arx
First released:
17 May 2025Last updated:
02 June 2025Installs:
0Plugin type:
Reader, Sample data, Widget, Writer
Workflow step:
Image annotation
Image segmentation
Controls
fspi-analysisA simple plugin to perform fspi analysis within napari
- Olivier Cahn
First released:
18 May 2025Last updated:
01 June 2025Installs:
0Plugin type:
Widget
cellfinder
cellfinderAutomated 3D cell detection in large microscopy images
First released:
17 January 2020Last updated:
30 May 2025Installs:
12KPlugin type:
Sample data, Widget
brainrender
brainrender-napariA napari plugin to render BrainGlobe atlases and associated data as layers.
First released:
13 October 2023Last updated:
30 May 2025Installs:
4.9KPlugin type:
Widget
brainglobe-napari-io
brainglobe-napari-ioRead and write files from the BrainGlobe computational neuroanatomy suite into napari
First released:
12 March 2021Last updated:
30 May 2025Installs:
19KPlugin type:
Reader, Writer
brainglobe-segmentation
brainglobe-segmentationSegmentation of anatomical structures in a common coordinate space
First released:
06 November 2023Last updated:
30 May 2025Installs:
6KPlugin type:
Widget