Discover, install, and share napari plugins

  • Discover plugins that solve your image analysis challenges
  • Learn how to install into napari
  • Share your image analysis tools with napari’s growing community
  • Share your image analysis tools with napari’s growing community

Browse plugins: 167

napari-IP-workflow

A plugin to do image preprocessing, segmentation, and measurements on other images.

  • Jay Unruh
  • version
    0.0.2
  • release date
    17 May 2022
  • license
    GPL-3.0
  • Python version
    >=3.8
  • operating system
    All

    vessel-express-napari

    A simple plugin for 3D vessel segmentation

    • Lennart Kowitz
    • version
      0.0.8
    • release date
      17 May 2022
    • license
      BSD-3-Clause
    • Python version
      >=3.7
    • operating system
      All

      blik

      Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

      • Blik Team
      • version
        0.3.1
      • release date
        17 May 2022
      • license
        GPL-3.0
      • Python version
        >=3.8
      • operating system
        MacOS, Windows, POSIX, Unix

        napari-sim-processor

        A napari widget to process Structured Illumination Microscopy data with gpu acceleration

        • Andrea Bassi and Mark Neil
        • version
          0.0.6
        • release date
          16 May 2022
        • license
          BSD-3-Clause
        • Python version
          >=3.8
        • operating system
          All
          Image modality:
          Fluorescence microscopy
          Workflow step:
          Image reconstruction

        napari-assistant

        A pocket calculator like interface to image processing in napari

        • Robert Haase, Ryan Savill
        • version
          0.3.4
        • release date
          15 May 2022
        • license
          BSD-3-Clause
        • Python version
          >=3.7
        • operating system
          information not submitted

          napari-time-slicer

          A meta plugin for processing timelapse data in napari timepoint by timepoint

          • Robert Haase
          • version
            0.4.4
          • release date
            15 May 2022
          • license
            BSD-3-Clause
          • Python version
            >=3.7
          • operating system
            All

            napari-pyclesperanto-assistant

            GPU-accelerated image processing in napari using OpenCL

            • Robert Haase, Talley Lambert
            • version
              0.18.1
            • release date
              15 May 2022
            • license
              BSD-3-Clause
            • Python version
              >=3.6
            • operating system
              All
              Workflow step:
              Image Segmentation
              Image correction
              Image reconstruction
              Image enhancement
              Object feature extraction
              Morphological operations
              Image feature detection
              Visualization

            napari-workflow-inspector

            Inspect relationships between image processing operations in active workflows in napari

            • Robert Haase
            • version
              0.2.2
            • release date
              15 May 2022
            • license
              BSD-3-Clause
            • Python version
              >=3.7
            • operating system
              All

              devbio-napari

              A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.

              • Robert Haase
              • version
                0.5.4
              • release date
                13 May 2022
              • license
                BSD-3-Clause
              • Python version
                >=3.7
              • operating system
                All

                napari-roi-registration

                A plugin to perform roi registration.

                • Andrea Bassi and Giorgia Tortora
                • version
                  0.0.9
                • release date
                  13 May 2022
                • license
                  BSD-3-Clause
                • Python version
                  >=3.8
                • operating system
                  All
                  Workflow step:
                  Image registration

                napari-psf-simulator

                A plugin for simulations of the Point Spread Function, with aberrations

                • Andrea Bassi
                • version
                  0.1.4
                • release date
                  12 May 2022
                • license
                  BSD-3-Clause
                • Python version
                  >=3.8
                • operating system
                  All
                  Image modality:
                  Fluorescence microscopy

                napari-imsmicrolink

                Plugin to perform IMS to microscopy registration using laser ablation marks.

                • Nathan Heath Patterson
                • Lukasz Migas
                • version
                  0.1.7
                • release date
                  11 May 2022
                • license
                  MIT
                • Python version
                  >=3.7
                • operating system
                  All

                  palmari

                  A pipeline for PALM movies analysis (pre-processing, localization, drifft correction, tracking)

                  • Hippolyte Verdier
                  • version
                    0.1.2
                  • release date
                    10 May 2022
                  • license
                    "CeCILL"
                  • Python version
                    >=3.8
                  • operating system
                    All

                    napari-labeling

                    A napari plugin for handling overlapping labeling data

                    • Tom Burke
                    • version
                      0.1.2
                    • release date
                      10 May 2022
                    • license
                      BSD-3-Clause
                    • Python version
                      >=3.7
                    • operating system
                      All

                      napari-cupy-image-processing

                      GPU-accelerated image processing using CUDA

                      • Robert Haase
                      • version
                        0.2.3
                      • release date
                        08 May 2022
                      • license
                        MIT
                      • Python version
                        >=3.7
                      • operating system
                        All
                        Workflow step:
                        Image Segmentation
                        Image correction
                        Image reconstruction
                        Image enhancement
                        Morphological operations
                        Image feature detection

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