Plugin exploring different options for reading and writing compressed and portable labels layers in napari.
Draga Doncila
Create graphs
Andrey Aristov
This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).
Marcelo Leomil Zoccoler
Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures
Hanjin Liu
A plugin that allows you to run macros on the images for any kind of image processing.
Jaison John
Locate bacteria in CLSM obtained infected bone tissue images
Shibarjun Mandal
Plugin for cell segmentation in 3D
Import Trackmate XML files for Track Visualization and analysis in Napari.
Varun Kapoor, Mari Tolonen, Jakub Sedzinski
Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.