The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

Plugins

Browse plugins: 501

napari OME-Zarr Navigator

napari-ome-zarr-navigator

A plugin to browse OME-Zarr plates by conditions and load images, labels and features from ROIs

  • Fabio Steffen
  • Joel Luethi
  • First released:

    19 July 2024
  • Last updated:

    01 May 2025
  • Installs:

    327
  • Plugin type:

    Sample data, Widget
Workflow step:
Visualization

BrainGlobe Registration

brainglobe-registration

A napari plugin for registration to a BrainGlobe atlas.

    • First released:

      27 January 2025
    • Last updated:

      01 May 2025
    • Installs:

      104
    • Plugin type:

      Sample data, Widget

    nnInteractive

    napari-nninteractive

    nnInteractive plugin for Napari

    • Lars Krämer
    • Fabian Isensee
    • Maximilian Rokuss
    • First released:

      11 March 2025
    • Last updated:

      30 April 2025
    • Installs:

      648
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    Segment Anything V2

    napari-SAMV2

    Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data.

    • Krishnan Venkataraman
    • First released:

      08 October 2024
    • Last updated:

      29 April 2025
    • Installs:

      567
    • Plugin type:

      Widget
    Workflow step:
    Image segmentation
    Image annotation

    Timelapse Processor

    napari-timelapse-processor

    meta plugin to ease processing timelapse image data

    • Johannes Soltwedel
    • First released:

      15 July 2024
    • Last updated:

      29 April 2025
    • Installs:

      1.5K
    • Plugin type:

      information not submitted
    Workflow step:
    Image annotation
    Image segmentation

    napari skimage

    napari-skimage

    A plugin to apply scikit-image operations

    • Guillaume Witz
    • First released:

      29 May 2024
    • Last updated:

      29 April 2025
    • Installs:

      956
    • Plugin type:

      Widget
    Workflow step:
    Image segmentation

    empanada-napari

    empanada-napari

    Napari plugin of algorithms for Panoptic Segmentation of organelles in EM

    • Madeline Barry
    • Abhishek Bhardwaj
    • Ryan Conrad
    • First released:

      04 March 2022
    • Last updated:

      28 April 2025
    • Installs:

      4.1K
    • Plugin type:

      Widget

    CCI Annotator

    napari-cci-annotator

    Plugin to simplify annotations of datasets

    • Anders Folkesson
    • First released:

      28 April 2025
    • Last updated:

      28 April 2025
    • Installs:

      50
    • Plugin type:

      Widget
    Workflow step:
    Image segmentation
    Image annotation

    Brainways

    brainways

    Brainways

    • Ben Kantor
    • First released:

      26 May 2023
    • Last updated:

      27 April 2025
    • Installs:

      2.6K
    • Plugin type:

      Reader, Sample data, Widget

    Feature Forest

    featureforest

    A napari plugin for segmentation using vision transformer features

      • First released:

        10 October 2024
      • Last updated:

        25 April 2025
      • Installs:

        162
      • Plugin type:

        Widget
      Workflow step:
      Image segmentation
      Image annotation

      vollseg-napari-trackmate

      vollseg-napari-trackmate

      Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library

      • Varun Kapoor
      • Mari Tolonen
      • Jakub Sedzinski
      • First released:

        31 December 2022
      • Last updated:

        25 April 2025
      • Installs:

        1.6K
      • Plugin type:

        Sample data, Widget

      T-MIDAS

      napari-tmidas

      A plugin for batch processing of confocal and whole-slide microscopy images of biological tissues

      • Marco Meer
      • First released:

        05 March 2025
      • Last updated:

        24 April 2025
      • Installs:

        114
      • Plugin type:

        Reader, Sample data, Widget, Writer
      Workflow step:
      Image segmentation
      Image annotation

      SAM2Long

      napari-sam2long

      A plugin for interactive 3D (volumetric or time-lapse) segmentation using Meta's Segment Anything Model 2 (SAM2).

      • Mai Hoang
      • First released:

        14 April 2025
      • Last updated:

        22 April 2025
      • Installs:

        57
      • Plugin type:

        Widget
      Workflow step:
      Image segmentation
      Image annotation

      napari spatialdata

      napari-spatialdata

      Interactive visualization of spatial omics data with napari

      • giovanni palla
      • First released:

        06 July 2022
      • Last updated:

        21 April 2025
      • Installs:

        14K
      • Plugin type:

        Reader, Widget

      Frontveg

      frontveg

      Segmentation of vegetation located to close to camera

      • Herearii Metuarea
      • First released:

        20 April 2025
      • Last updated:

        20 April 2025
      • Installs:

        10
      • Plugin type:

        Widget
      Workflow step:
      Image annotation
      Image segmentation