The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

Plugins

Browse plugins: 506

arcosPx

arcosPx-napari

A plugin to track spatio-temporal correlations in images

  • Benjamin Grädel
  • First released:

    27 March 2025
  • Last updated:

    13 June 2025
  • Installs:

    34
  • Plugin type:

    Widget
Workflow step:
Image segmentation

napari vedo bridge

napari-vedo-bridge

Transfer mesh data between napari and vedo for interactive processing

  • Johannes Soltwedel
  • Marco Musy
  • First released:

    03 July 2023
  • Last updated:

    13 June 2025
  • Installs:

    816
  • Plugin type:

    Reader, Sample data, Widget, Writer

napari STRESS

napari-stress

Interactive surface analysis in napari for measuring mechanical stresses in biological tissues

  • Johannes Soltwedel
  • Ben J. Gross
  • Elijah Shelton
  • Carlos Gomez
  • Otger Campas
  • First released:

    02 June 2022
  • Last updated:

    13 June 2025
  • Installs:

    1.5K
  • Plugin type:

    Sample data, Widget

Save multidimensional file as folder of tifs

napari-file2folder

Save multidimensional file as folder of tifs

  • Jules Vanaret
  • First released:

    28 October 2024
  • Last updated:

    12 June 2025
  • Installs:

    82
  • Plugin type:

    Widget
Workflow step:
Image annotation
Image segmentation

Tissue Cuboid Analysis

napari-tissue-cuboid-analysis

analysis of the shape of tissue explants in CT images

  • Bastien Chesaux Dapia
  • First released:

    11 June 2025
  • Last updated:

    11 June 2025
  • Installs:

    0
  • Plugin type:

    Widget
Workflow step:
Image annotation
Image segmentation

Napari Topological Skeleton Analysis

napari-toska

Extracts and analyses topological skeletons as undirected graphs

    • First released:

      08 July 2024
    • Last updated:

      11 June 2025
    • Installs:

      91
    • Plugin type:

      Widget

    Proofread Brainbow

    napari-proofread-brainbow

    Proofreading Brainbow images with napari

    • Seongbin Lim
    • First released:

      30 August 2022
    • Last updated:

      11 June 2025
    • Installs:

      255
    • Plugin type:

      Widget
    Workflow step:
    Image annotation

    Loading tiffs using memory map

    napari-memmap-tiff

    When installed and enabled in the options, it adds an option that when enabled will make napari load tiffs via memory mapping instead of fully into RAM.

    • Matthew Einhorn
    • First released:

      10 June 2025
    • Last updated:

      11 June 2025
    • Installs:

      0
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    DINOSim Segmentation

    napari-dinosim

    A simple plugin to use DINOSim in napari

    • Aitor Gonzalez-Marfil
    • First released:

      05 March 2025
    • Last updated:

      09 June 2025
    • Installs:

      122
    • Plugin type:

      Widget
    Workflow step:
    Image segmentation
    Image annotation

    AFMReader

    napari-afmreader

    Napari plugin using AFMReader to load various Atomic Force Microscopy Images.

      • First released:

        07 June 2025
      • Last updated:

        07 June 2025
      • Installs:

        0
      • Plugin type:

        Reader

      NuclePhaser

      napari-nuclephaser

      A Napari plugin to detect and count nuclei on phase contrast images

      • Nikita Voloshin
      • First released:

        02 April 2025
      • Last updated:

        07 June 2025
      • Installs:

        62
      • Plugin type:

        Widget
      Workflow step:
      Image annotation
      Image segmentation

      movement

      movement

      Analysis of body movement

        • First released:

          02 April 2020
        • Last updated:

          06 June 2025
        • Installs:

          4.9K
        • Plugin type:

          Widget

        napari-pitcount-cfim

        napari-pitcount-cfim

        A pipeline for stuff #TODO: Get knowledge to write a proper description Pitcount

        • Markus L. Bille
        • First released:

          24 April 2025
        • Last updated:

          04 June 2025
        • Installs:

          0
        • Plugin type:

          Widget

        Frontveg

        frontveg

        Segmentation of vegetation located to close to camera

        • Herearii Metuarea
        • First released:

          20 April 2025
        • Last updated:

          04 June 2025
        • Installs:

          10
        • Plugin type:

          Widget
        Workflow step:
        Image annotation
        Image segmentation

        domb-napari

        domb-napari

        napari plugin for analyzing the redistribution of fluorescence-labeled proteins

        • Borys Olifirov
        • First released:

          22 November 2023
        • Last updated:

          03 June 2025
        • Installs:

          416
        • Plugin type:

          Widget