The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

Plugins

Browse plugins: 506

Tapenade Processing

napari-tapenade-processing

A visual pipeline to process images with Tapenade in Napari

  • Jules Vanaret
  • First released:

    13 August 2024
  • Last updated:

    13 June 2025
  • Installs:

    270
  • Plugin type:

    Widget
Workflow step:
Image segmentation
Image annotation

Vessel Quality Check

VessQC

Napari plugin for checking and correcting the segmentation

    • First released:

      18 February 2025
    • Last updated:

      13 June 2025
    • Installs:

      54
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    Brendan Beads

    brendan-beads

    Calculating and visualizing distances of beads to surface

    • Anders Folkesson
    • First released:

      20 May 2025
    • Last updated:

      13 June 2025
    • Installs:

      0
    • Plugin type:

      Widget
    Workflow step:
    Image segmentation
    Image annotation

    arcosPx

    arcosPx-napari

    A plugin to track spatio-temporal correlations in images

    • Benjamin Grädel
    • First released:

      27 March 2025
    • Last updated:

      13 June 2025
    • Installs:

      34
    • Plugin type:

      Widget
    Workflow step:
    Image segmentation

    napari vedo bridge

    napari-vedo-bridge

    Transfer mesh data between napari and vedo for interactive processing

    • Johannes Soltwedel
    • Marco Musy
    • First released:

      03 July 2023
    • Last updated:

      13 June 2025
    • Installs:

      816
    • Plugin type:

      Reader, Sample data, Widget, Writer

    napari STRESS

    napari-stress

    Interactive surface analysis in napari for measuring mechanical stresses in biological tissues

    • Johannes Soltwedel
    • Ben J. Gross
    • Elijah Shelton
    • Carlos Gomez
    • Otger Campas
    • First released:

      02 June 2022
    • Last updated:

      13 June 2025
    • Installs:

      1.5K
    • Plugin type:

      Sample data, Widget

    Save multidimensional file as folder of tifs

    napari-file2folder

    Save multidimensional file as folder of tifs

    • Jules Vanaret
    • First released:

      28 October 2024
    • Last updated:

      12 June 2025
    • Installs:

      82
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    Tissue Cuboid Analysis

    napari-tissue-cuboid-analysis

    analysis of the shape of tissue explants in CT images

    • Bastien Chesaux Dapia
    • First released:

      11 June 2025
    • Last updated:

      11 June 2025
    • Installs:

      0
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    Napari Topological Skeleton Analysis

    napari-toska

    Extracts and analyses topological skeletons as undirected graphs

      • First released:

        08 July 2024
      • Last updated:

        11 June 2025
      • Installs:

        91
      • Plugin type:

        Widget

      Proofread Brainbow

      napari-proofread-brainbow

      Proofreading Brainbow images with napari

      • Seongbin Lim
      • First released:

        30 August 2022
      • Last updated:

        11 June 2025
      • Installs:

        255
      • Plugin type:

        Widget
      Workflow step:
      Image annotation

      Loading tiffs using memory map

      napari-memmap-tiff

      When installed and enabled in the options, it adds an option that when enabled will make napari load tiffs via memory mapping instead of fully into RAM.

      • Matthew Einhorn
      • First released:

        10 June 2025
      • Last updated:

        11 June 2025
      • Installs:

        0
      • Plugin type:

        Widget
      Workflow step:
      Image annotation
      Image segmentation

      DINOSim Segmentation

      napari-dinosim

      A simple plugin to use DINOSim in napari

      • Aitor Gonzalez-Marfil
      • First released:

        05 March 2025
      • Last updated:

        09 June 2025
      • Installs:

        122
      • Plugin type:

        Widget
      Workflow step:
      Image segmentation
      Image annotation

      AFMReader

      napari-afmreader

      Napari plugin using AFMReader to load various Atomic Force Microscopy Images.

        • First released:

          07 June 2025
        • Last updated:

          07 June 2025
        • Installs:

          0
        • Plugin type:

          Reader

        NuclePhaser

        napari-nuclephaser

        A Napari plugin to detect and count nuclei on phase contrast images

        • Nikita Voloshin
        • First released:

          02 April 2025
        • Last updated:

          07 June 2025
        • Installs:

          62
        • Plugin type:

          Widget
        Workflow step:
        Image annotation
        Image segmentation

        movement

        movement

        Analysis of body movement

          • First released:

            02 April 2020
          • Last updated:

            06 June 2025
          • Installs:

            4.9K
          • Plugin type:

            Widget