BactFit

BactFit

Coordinate transformations for bacterial cell masks

A package for analysing/fitting the shape of rod shaped bacterial cells.

Author: Piers Turner, Kapanidis Group, University of Oxford.

Version:

  • 0.0.1

Last updated:

  • 04 June 2024

First released:

  • 04 June 2024

License:

Supported data:

  • Information not submitted

Plugin type:

  • Information not submitted

GitHub activity:

  • Stars: 0
  • Forks: 0
  • Issues + PRs: 0

Python versions supported:

Operating system:

Requirements:

  • tifffile
  • numpy
  • opencv-python
  • matplotlib
  • scikit-image
  • scipy
  • shapely
  • tqdm