Discover, install, and share napari plugins

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Browse plugins: 230

napari-buds

Random-forest automated bud annotation

  • Sander van Otterdijk
  • version
    0.0.5
  • release date
    02 October 2022
  • license
    BSD-3-Clause
  • Python version
    >=3.8
  • operating system
    All

    napari-assistant

    A pocket calculator like interface to image processing in napari

    • Robert Haase
    • Ryan Savill
    • version
      0.3.14
    • release date
      02 October 2022
    • license
      BSD-3-Clause
    • Python version
      >=3.8
    • operating system
      All

      RedLionfish

      Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.

      • Luis Perdigao
      • version
        0.8
      • release date
        30 September 2022
      • license
        Apache-2.0
      • Python version
        information not submitted
      • operating system
        MacOS, Windows, Linux

        hesperos

        A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.

        • Charlotte Godard
        • version
          0.1.29
        • release date
          30 September 2022
        • license
          BSD-3-Clause
        • Python version
          >=3.8
        • operating system
          All

          devbio-napari

          A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.

          • Robert Haase
          • version
            0.7.0
          • release date
            30 September 2022
          • license
            BSD-3-Clause
          • Python version
            >=3.8
          • operating system
            All

            koopa-viz

            Vizualization plugin for koopa image analysis

            • Bastian Eichenberger
            • version
              0.0.1
            • release date
              29 September 2022
            • license
              MIT
            • Python version
              >=3.8
            • operating system
              All

              napari-nD-annotator

              A toolbox for annotating objects one by one in nD

              • David Bauer
              • Jozsef Molnar
              • Dominik Hirling
              • version
                0.0.8
              • release date
                29 September 2022
              • license
                BSD-3-Clause
              • Python version
                >=3.8
              • operating system
                All

                napari-boxmanager

                Particle selection tool for cryo-em

                • Markus Stabrin
                • version
                  0.2.8
                • release date
                  28 September 2022
                • license
                  MPL-2.0
                • Python version
                  >=3.10
                • operating system
                  All

                  napari-stress

                  Interactive surface analysis in napari for measuring mechanical stresses in biological tissues

                  • Johannes Müller
                  • Ben J. Gross
                  • Robert Haase
                  • Elijah Shelton
                  • Carlos Gomez
                  • Otger Campas
                  • version
                    0.0.21
                  • release date
                    26 September 2022
                  • license
                    BSD-3-Clause
                  • Python version
                    >=3.8
                  • operating system
                    All

                    napari-brightness-contrast

                    Advanced layer visualization options

                    • Robert Haase
                    • version
                      0.1.8
                    • release date
                      25 September 2022
                    • license
                      BSD-3-Clause
                    • Python version
                      >=3.7
                    • operating system
                      All

                      napari-skimage-regionprops

                      A regionprops table widget plugin for napari

                      • Robert Haase
                      • version
                        0.5.4
                      • release date
                        24 September 2022
                      • license
                        BSD-3-Clause
                      • Python version
                        >=3.8
                      • operating system
                        All
                        Workflow step:
                        Object feature extraction

                      napari-simpleitk-image-processing

                      Process and analyze images using SimpleITK in napari

                      • Robert Haase
                      • version
                        0.4.4
                      • release date
                        24 September 2022
                      • license
                        BSD-3-Clause
                      • Python version
                        >=3.8
                      • operating system
                        All
                        Workflow step:
                        Image Segmentation
                        Image correction
                        Image reconstruction
                        Image enhancement
                        Object feature extraction
                        Morphological operations
                        Image feature detection

                      napari-pyclesperanto-assistant

                      GPU-accelerated image processing in napari using OpenCL

                      • Robert Haase
                      • Talley Lambert
                      • version
                        0.20.0
                      • release date
                        24 September 2022
                      • license
                        BSD-3-Clause
                      • Python version
                        >=3.6
                      • operating system
                        All
                        Workflow step:
                        Visualization
                        Image Segmentation
                        Image correction
                        Image reconstruction
                        Image enhancement
                        Object feature extraction
                        Morphological operations
                        Image feature detection

                      napari-lattice

                      Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

                      • Pradeep Rajasekhar
                      • Lachlan Whitehead
                      • Robert Haase
                      • version
                        0.2.1
                      • release date
                        23 September 2022
                      • license
                        GPL-3.0
                      • Python version
                        >=3.8
                      • operating system
                        All

                        napari-bleach-correct

                        A napari plugin to correct time-lapse images for photobleaching.

                        • Alexander Marx
                        • version
                          0.0.1
                        • release date
                          22 September 2022
                        • license
                          MIT
                        • Python version
                          >=3.8
                        • operating system
                          All

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