Discover, install, and share napari plugins

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Browse plugins: 257

Apple

napari-apple

Detection of apple based on YOLOv4 model

  • Herearii Metuarea
  • Version
    0.0.2
  • Release date
    08 December 2022
  • Plugin type
    Reader, Writer, Widget, Sample data

    napari okapi-em

    okapi-em

    napari plugin to deal with charging artifacts in tomography electron microscopy data

    • Luis Perdigao
    • Version
      0.0.7
    • Release date
      08 December 2022
    • Plugin type
      Widget

      Blossom

      napari-blossom

      Segmentation of blossom apple tree images

      • Herearii Metuarea
      • Version
        0.0.3
      • Release date
        08 December 2022
      • Plugin type
        Reader, Writer, Widget, Sample data

        blik

        blik

        Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

        • Blik Team
        • Version
          0.3.4
        • Release date
          07 December 2022
        • Plugin type
          Reader, Writer, Widget

          Koopa

          koopa-viz

          Vizualization plugin for koopa image analysis

          • Bastian Eichenberger
          • Version
            0.0.2
          • Release date
            06 December 2022
          • Plugin type
            Widget

            brainreg-napari

            brainreg-napari

            Multi-atlas whole-brain microscopy registration

              • Version
                0.1.1
              • Release date
                06 December 2022
              • Plugin type
                Widget, Sample data
                Workflow step:
                Image registration

              stardist-napari

              stardist-napari

              Object Detection with Star-convex Shapes

              • Uwe Schmidt
              • Martin Weigert
              • Version
                2022.12.6
              • Release date
                06 December 2022
              • Plugin type
                Widget, Sample data
                Workflow step:
                Image Segmentation
                Image modality:
                Medical imaging

              napari DeepLabCut

              napari-deeplabcut

              napari + DeepLabCut annotation tool

              • Jessy Lauer
              • Version
                0.0.9
              • Release date
                06 December 2022
              • Plugin type
                Reader, Writer, Widget

                PartSeg-smfish

                PartSeg-smfish

                PartSeg and napari plugin for smfish data

                • Grzegorz Bokota
                • Version
                  0.1.3
                • Release date
                  06 December 2022
                • Plugin type
                  Widget

                  btrack

                  btrack

                  A framework for Bayesian multi-object tracking

                  • Alan R. Lowe
                  • Version
                    0.5.0
                  • Release date
                    05 December 2022
                  • Plugin type
                    Reader
                    Workflow step:
                    Object tracking

                  Segment organoid

                  napari-segment

                  Segment organoids and measure intensities

                  • Andrey Aristov
                  • Version
                    0.3.7
                  • Release date
                    05 December 2022
                  • Plugin type
                    Reader, Writer, Widget, Sample data

                    Hesperos application

                    hesperos

                    A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.

                    • Charlotte Godard
                    • Version
                      0.1.36
                    • Release date
                      30 November 2022
                    • Plugin type
                      Widget

                      napari pystackreg

                      napari-pystackreg

                      Robust image registration for napari

                      • Gregor Lichtner
                      • Version
                        0.1.3
                      • Release date
                        28 November 2022
                      • Plugin type
                        Widget, Sample data

                        napari Affinities

                        napari-affinities

                        A plugin for creating, visualizing, and processing affinities

                        • William Patton
                        • Version
                          0.1.3
                        • Release date
                          27 November 2022
                        • Plugin type
                          Widget, Sample data

                          napari validate random label predictions

                          napari-validate-random-label-predictions

                          Validate separate instances of label predictions manually

                          • Niklas Netter
                          • Version
                            0.0.1
                          • Release date
                            23 November 2022
                          • Plugin type
                            Widget

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