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VollSeg Napari MTrack Plugin

vollseg-napari-mtrack

Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch

    License BSD-3 PyPI Python Version tests codecov napari hub

    Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch


    This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

    Installation

    You can install vollseg-napari-mtrack via pip:

    pip install vollseg-napari-mtrack

    To install latest development version :

    pip install git+https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack.git

    Contributing

    Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

    License

    Distributed under the terms of the BSD-3 license, "vollseg-napari-mtrack" is free and open source software

    Issues

    If you encounter any problems, please file an issue along with a detailed description.

    Version:

    • 1.3.3

    Last updated:

    • 27 January 2023

    First released:

    • 20 December 2022

    License:

    • BSD-3-Clause

    Supported data:

    • Information not submitted

    Open extension:

    • Information not submitted

    Save extension:

    Save layers:

    GitHub activity:

    • Stars: 3
    • Forks: 0
    • Issues + PRs: 0

    Python versions supported:

    Operating system:

    Requirements:

    • numpy
    • magicgui
    • qtpy
    • caped-ai

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