• Version:

    • 0.1.2
  • Release date:

    • 17 October 2021
  • First released:

    • 11 August 2021
  • Development status:

    • 2 - Pre-Alpha
  • License:

    • GPL-3.0

Github Activity

  • Stars: 2
  • Forks: 1
  • Issues + PRs: 0
  • Python versions supported:

    • >=3.7
  • Operating system:

    • OS Independent
  • Requirements:

    • napari-plugin-engine (>=0.1.4)
    • numpy
    • stracking (>=0.1.2)

napari-stracking

Linking and tracks analysis

The STracking suite provides a set of plugins for particles tracking in 2D+t and 3D+t images. A classical particles tracking pipeline is made of 5 sequential steps:

  • Particles detection frame by frame

img

  • Particles properties calculation (optional)

img

  • Particles linking

img

  • Tracks features extraction (optional)

img

  • Tracks filtering (optional)

img

Installation

You can install napari-stracking via pip:

pip install napari-stracking

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the GNU GPL v3.0 license, "napari-tracks-reader" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

  • Version:

    • 0.1.2
  • Release date:

    • 17 October 2021
  • First released:

    • 11 August 2021
  • Development status:

    • 2 - Pre-Alpha
  • License:

    • GPL-3.0

Github Activity

  • Stars: 2
  • Forks: 1
  • Issues + PRs: 0
  • Python versions supported:

    • >=3.7
  • Operating system:

    • OS Independent
  • Requirements:

    • napari-plugin-engine (>=0.1.4)
    • numpy
    • stracking (>=0.1.2)

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