napari-mm3

napari-mm3

a plugin for mother machine image analysis


    License PyPI Python Version tests codecov napari hub

    A plugin for Mother Machine Image Analysis by Jun Lab.


    This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

    Installation

    Ensure python and napari are installed in your system. To install the plugin, use:

    pip install napari-mm3

    Contributing

    Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

    License

    Distributed under the terms of the BSD-3 license, "napari-mm3" is free and open source software

    Issues

    If you encounter any problems, please file an issue along with a detailed description.

    Version:

    • 0.0.4

    Release date:

    • 02 June 2022

    First released:

    • 02 June 2022

    License:

    • BSD-3-Clause

    Supported data:

    • Information not submitted

    Open extension:

    Save extension:

    • Information not submitted

    Save layers:

    GitHub activity:

    • Stars: 2
    • Forks: 2
    • Issues + PRs: 0

    Python versions supported:

    Operating system:

    Requirements:

    • napari-plugin-engine (>=0.1.4)
    • numpy
    • h5py
    • tifffile (==2021.11.2)
    • scikit-learn
    • scikit-image
    • tensorflow
    • pims-nd2
    • seaborn
    • pyqt5

    Sign up to receive updates