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Ortho Viewer Widget

napari-3d-ortho-viewer

Napari 3D Ortho Viewer - an ortho viewer for napari for 3D images

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Napari 3D Ortho Viewer - an ortho viewer for napari for 3D images


https://github.com/gatoniel/napari-3d-ortho-viewer/assets/40384506/4296dc11-ea37-40a0-8b17-eeb77480672f

This plugin is heavily inspired by ortho-view-napari.

Check out this post on image.sc (https://forum.image.sc/t/napari-visualization-in-3-planes/57768) for more infos about multiview support in napari.

This viewer has some additional features:

  • double click to jump to specific position in all slices
  • additional 3d view of 3d stack with lines or planes indicating current position

Installation

You can install napari-3d-ortho-viewer via pip:

pip install napari-3d-ortho-viewer

To install latest development version :

pip install git+https://github.com/gatoniel/napari-3d-ortho-viewer.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the MIT license, "napari-3d-ortho-viewer" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Version:

  • 0.1.5

Last updated:

  • 21 November 2023

First released:

  • 03 December 2021

License:

Supported data:

  • Information not submitted

Plugin type:

GitHub activity:

  • Stars: 6
  • Forks: 2
  • Issues + PRs: 1

Python versions supported:

Operating system:

Requirements:

  • numpy
  • magicgui
  • qtpy
  • scikit-image

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