morphometrics

A plugin for quantifying shape and neighborhoods from images.

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This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation¶

You can install morphometrics via pip:

pip install morphometrics

To install latest development version :

pip install git+https://github.com/kevinyamauchi/morphometrics.git

Example applications¶

	measure the distance between surfaces
	napari plugin for measuring properties of segmented objects (regionprops)
	object classification
	mesh binary mask

Contributing¶

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License¶

Distributed under the terms of the BSD-3 license, "morphometrics" is free and open source software

Issues¶

If you encounter any problems, please file an issue along with a detailed description.