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Browse plugins: 230

napari-assistant

A pocket calculator like interface to image processing in napari

  • Robert Haase
  • Ryan Savill
  • version
    0.3.14
  • release date
    02 October 2022
  • license
    BSD-3-Clause
  • Python version
    >=3.8
  • operating system
    All

    RedLionfish

    Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.

    • Luis Perdigao
    • version
      0.8
    • release date
      30 September 2022
    • license
      Apache-2.0
    • Python version
      information not submitted
    • operating system
      MacOS, Windows, Linux

      hesperos

      A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.

      • Charlotte Godard
      • version
        0.1.29
      • release date
        30 September 2022
      • license
        BSD-3-Clause
      • Python version
        >=3.8
      • operating system
        All

        devbio-napari

        A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.

        • Robert Haase
        • version
          0.7.0
        • release date
          30 September 2022
        • license
          BSD-3-Clause
        • Python version
          >=3.8
        • operating system
          All

          koopa-viz

          Vizualization plugin for koopa image analysis

          • Bastian Eichenberger
          • version
            0.0.1
          • release date
            29 September 2022
          • license
            MIT
          • Python version
            >=3.8
          • operating system
            All

            napari-nD-annotator

            A toolbox for annotating objects one by one in nD

            • David Bauer
            • Jozsef Molnar
            • Dominik Hirling
            • version
              0.0.8
            • release date
              29 September 2022
            • license
              BSD-3-Clause
            • Python version
              >=3.8
            • operating system
              All

              napari-boxmanager

              Particle selection tool for cryo-em

              • Markus Stabrin
              • version
                0.2.8
              • release date
                28 September 2022
              • license
                MPL-2.0
              • Python version
                >=3.10
              • operating system
                All

                napari-stress

                Interactive surface analysis in napari for measuring mechanical stresses in biological tissues

                • Johannes Müller
                • Ben J. Gross
                • Robert Haase
                • Elijah Shelton
                • Carlos Gomez
                • Otger Campas
                • version
                  0.0.21
                • release date
                  26 September 2022
                • license
                  BSD-3-Clause
                • Python version
                  >=3.8
                • operating system
                  All

                  napari-brightness-contrast

                  Advanced layer visualization options

                  • Robert Haase
                  • version
                    0.1.8
                  • release date
                    25 September 2022
                  • license
                    BSD-3-Clause
                  • Python version
                    >=3.7
                  • operating system
                    All

                    napari-skimage-regionprops

                    A regionprops table widget plugin for napari

                    • Robert Haase
                    • version
                      0.5.4
                    • release date
                      24 September 2022
                    • license
                      BSD-3-Clause
                    • Python version
                      >=3.8
                    • operating system
                      All
                      Workflow step:
                      Object feature extraction

                    napari-simpleitk-image-processing

                    Process and analyze images using SimpleITK in napari

                    • Robert Haase
                    • version
                      0.4.4
                    • release date
                      24 September 2022
                    • license
                      BSD-3-Clause
                    • Python version
                      >=3.8
                    • operating system
                      All
                      Workflow step:
                      Image Segmentation
                      Image correction
                      Image reconstruction
                      Image enhancement
                      Object feature extraction
                      Morphological operations
                      Image feature detection

                    napari-pyclesperanto-assistant

                    GPU-accelerated image processing in napari using OpenCL

                    • Robert Haase
                    • Talley Lambert
                    • version
                      0.20.0
                    • release date
                      24 September 2022
                    • license
                      BSD-3-Clause
                    • Python version
                      >=3.6
                    • operating system
                      All
                      Workflow step:
                      Image Segmentation
                      Image correction
                      Image reconstruction
                      Image enhancement
                      Object feature extraction
                      Morphological operations
                      Image feature detection
                      Visualization

                    napari-lattice

                    Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

                    • Pradeep Rajasekhar
                    • Lachlan Whitehead
                    • Robert Haase
                    • version
                      0.2.1
                    • release date
                      23 September 2022
                    • license
                      GPL-3.0
                    • Python version
                      >=3.8
                    • operating system
                      All

                      napari-bleach-correct

                      A napari plugin to correct time-lapse images for photobleaching.

                      • Alexander Marx
                      • version
                        0.0.1
                      • release date
                        22 September 2022
                      • license
                        MIT
                      • Python version
                        >=3.8
                      • operating system
                        All

                        napari-pixel-correction

                        Plugin to correct manually pixel wrongly predicted on image by annotation

                        • Herearii Metuarea
                        • version
                          0.1.4
                        • release date
                          21 September 2022
                        • license
                          BSD-3-Clause
                        • Python version
                          >=3.8
                        • operating system
                          All

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