Bud Cell Segmenter

napari-bud-cell-segmenter

A plugin to segment embryonic mammary bud cells and detect 2 RNA probes


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    License BSD-3 PyPI Python Version tests codecov napari hub

    A plugin to segment embryonic mammary bud cells and detect 2 RNA probes


    This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

    Installation

    You can install napari-bud-cell-segmenter via pip:

    pip install napari-bud-cell-segmenter

    To install latest development version :

    pip install git+https://github.com/AurelienMaillot/napari-bud-cell-segmenter.git

    Contributing

    Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

    License

    Distributed under the terms of the BSD-3 license, "napari-bud-cell-segmenter" is free and open source software

    Issues

    If you encounter any problems, please file an issue along with a detailed description.

    Version:

    • 0.1.2

    Release date:

    • 14 November 2022

    First released:

    • 14 November 2022

    License:

    • BSD-3-Clause

    Supported data:

    • Information not submitted

    Open extension:

    Save extension:

    Save layers:

    GitHub activity:

    • Stars: 0
    • Forks: 0
    • Issues + PRs: 0

    Python versions supported:

    Operating system:

    Requirements:

    • numpy
    • magicgui
    • qtpy

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